miRBase entry: aqc-MIR166e

Stem-loop aqc-MIR166e


Accession
MI0012073
Description
Aquilegia caerulea aqc-MIR166e precursor miRNA
Gene family
MIPF0000004; MIR166


Sequence

uugagaggaauguugucugguucgaggccacuaacuuaacaacucuuaauugaaacucaaucuauaaccgguuagcaagugaaagcgcuugcgcucgcugguguuuguuuguuugugucgUCGGACCAGGCUUCAUUCCCCucaauu
(((((.((((((..(((((((((((.(.(((.(((..(((((......(((((...))))).....((((((..(((((((....)))))))....))))))..))))).))).))).).)))))))))))..)))))).)))))..

Structure
--     a      uu           g c   u   uu     cucuuaauugaaacucaaucuaua      --ua       a 
  uugag ggaaug  gucugguucga g cac aac  aacaa                        accggu    gcaagug a
  ||||| ||||||  ||||||||||| | ||| |||  |||||                        ||||||    |||||||  
  aacuC CCUUAC  CGGACCAGGCU c gug uug  uuguu                        uggucg    cguucgc a
uu     C      UU           g u   u   -u     ----------------------ug      cucg       g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR166e

Accession MIMAT0012555
Description Aquilegia caerulea aqc-miR166e mature miRNA
Sequence 121 - UCGGACCAGGCUUCAUUCCCC - 141
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56