miRBase entry: aqc-MIR169c

Stem-loop aqc-MIR169c


Accession
MI0012080
Description
Aquilegia caerulea aqc-MIR169c precursor miRNA


Sequence

aaugCAGCCAAGGAUGACUUGCCGGaacguuguuaaccaugcauaugaauaaugugaugauuaauuaugugaugaacauauuucuggcaaguuguccuucggcuacauuuu
((((.((((((((((((((((((((((...((((...(((.(((((((.((((......)))).))))))))))))))...)))))))))))))))))).)))).))))..

Structure
--    C    -                  cgu    aac   g       a    gu 
  aaug AGCC AAGGAUGACUUGCCGGaa   uguu   cau cauauga uaau  g
  |||| |||| ||||||||||||||||||   ||||   ||| ||||||| ||||   
  uuac ucgg uuccuguugaacggucuu   acaa   gua guguauu auua  a
uu    a    c                  uau    ---   -       a    gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR169c

Accession MIMAT0012562
Description Aquilegia caerulea aqc-miR169c mature miRNA
Sequence 5 - CAGCCAAGGAUGACUUGCCGG - 25
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56