miRBase entry: cte-mir-2703-1

Stem-loop cte-mir-2703-1

Accession

MI0012146

Description

Capitella teleta cte-mir-2703-1 precursor miRNA

Sequence

gacggaaccagugacuUGAGCUUACGAAUCAUCAGCCAUUgcucgcuuugaaaUGCUUUGAUUUGUAAGCUCAGCaggcgugguuucaaa
...(((((((((...((((((((((((((((..(((.(((...........)))))).))))))))))))))))...)).)))))))...

Structure

gac       -  gac                UC   C   gcuc 
   ggaacca gu   uUGAGCUUACGAAUCA  AGC AUU    g
   ||||||| ||   ||||||||||||||||  ||| |||    c
   cuuuggu cg   GACUCGAAUGUUUAGU  UCG Uaa    u
aaa       g  gaC                -U   -   aguu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

KB293371.1: 435-524 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cte-mir-2703-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cte-miR-2703-5p

Accession	MIMAT0013567
Description	Capitella teleta cte-miR-2703-5p mature miRNA
Sequence	17 - UGAGCUUACGAAUCAUCAGCCAUU - 40
Evidence	experimental 454 [1]

Mature cte-miR-2703-3p

Accession	MIMAT0013568
Description	Capitella teleta cte-miR-2703-3p mature miRNA
Sequence	54 - UGCUUUGAUUUGUAAGCUCAGC - 75
Evidence	experimental 454 [1]

References

PubMed ID: 19755470
MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record
"Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ"
"Proc Biol Sci (2009) 276:4315-4322