miRBase entry: bmo-mir-2729

Stem-loop bmo-mir-2729


Accession
MI0012177
Description
Bombyx mori bmo-mir-2729 precursor miRNA


Sequence

1966 reads, 40.0 reads per million, 32 experiments
agcaagcauuuaugcuggagugaguaacagauuuuaugaggucggUCCAUCGUGUUGGAGAUCGUCCGCGugaucuuuUGCCCUCGACUUUCCCUUGCA
.(((((.......(.(.(((.(.((((.(((((..(((.((.(((((..((......))))))).)).)))))))).)))))))).)).....))))).

Structure
a     cauuuau c g   u a    c     uu   a  u     CA  GU 
 gcaag       g u gag g guaa agauu  aug gg cggUC  UC  G
 |||||       | | ||| | |||| |||||  ||| || |||||  ||   
 CGUUC       C A CUC C CGUu ucuag  uGC CC GCUAG  AG  U
A     --CCUUU - G   - -    u     --   G  U     --  GU 


Annotation confidence Low
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Genome context
dbj|BSVE01000023.1|: 13449182-13449280 [+]

Database links

Mature bmo-miR-2729-5p

Accession MIMAT0012606
Description Bombyx mori bmo-miR-2729-5p mature miRNA
Sequence 46 - UCCAUCGUGUUGGAGAUCGUCCGCG - 70
Evidence experimental
cloned [1], RT-PCR [1]

Mature bmo-miR-2729-3p

Accession MIMAT0053138
Description Bombyx mori bmo-miR-2729-3p mature miRNA
Sequence 79 - UGCCCUCGACUUUCCCUUGCA - 99
Evidence experimental
cloned [1], RT-PCR [1]

References

  1. PubMed ID: 19699294
    A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
    "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
    "Genomics (2009) 94:438-444