miRBase entry: bmo-mir-2729

Stem-loop bmo-mir-2729


Accession
MI0012177
Description
Bombyx mori bmo-mir-2729 precursor miRNA


Sequence

28 reads, 9 reads per million, 3 experiments
agcaagcauuuaugcuggagugaguaacagAUUUUAUGAGGUCGGUCCAUcguguuggagaucguccgcgugaucuuuugcccucgacuuucccuugca
.(((((.......(.(.(((.(.((((.(((((..(((.((.(((((..((......))))))).)).)))))))).)))))))).)).....))))).

Structure
a     cauuuau c g   u a    c     UU   A  U     CA  gu 
 gcaag       g u gag g guaa agAUU  AUG GG CGGUC  Uc  g
 |||||       | | ||| | |||| |||||  ||| || |||||  ||   
 cguuc       c a cuc c cguu ucuag  ugc cc gcuag  ag  u
a     --ccuuu - g   - -    u     --   g  u     --  gu 


Annotation confidence Not enough data
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Genome context
NW_004581743.1: 826687-826785 [-]

Database links

Mature bmo-miR-2729

Accession MIMAT0012606
Description Bombyx mori bmo-miR-2729 mature miRNA
Sequence 31 - AUUUUAUGAGGUCGGUCCAU - 50
Evidence experimental
cloned [1], RT-PCR [1]

References

  1. PubMed ID: 19699294
    A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
    "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
    "Genomics (2009) 94:438-444