Stem-loop bmo-mir-2731-1

Accession

MI0012179

Description

Bombyx mori bmo-mir-2731-1 precursor miRNA

Sequence

7429 reads, 134.0 reads per million, 34 experiments

aaaccuaacagaUGCGAGACCAUGGUAUGUGGAaauaaaagccacccgguuuuuaucuuuccacaccaaaagaUCCACAUCUCCCGAGGUG
..((((...(((((.(.((.(.((((..(((((((((((((((....)))))))))..))))))))))...).))).)))))....)))).

Structure

aa    -aac     C A  C --A    AU      --         a 
  accu    agaUG G GA C   UGGU  GUGGAa  auaaaagcc c
  ||||    ||||| | || |   ||||  ||||||  |||||||||  
  UGGA    UCUAC C CU g   acca  caccuu  uauuuuugg c
-G    GCCC     A -  a aaa    --      uc         c 

Annotation confidence Low

Genome context

dbj|BSVE01000003.1|: 2861473-2861563 [-]

Mature bmo-miR-2731-5p

• Accession: MIMAT0012608
• Description: Bombyx mori bmo-miR-2731-5p mature miRNA
• Sequence: 13 - UGCGAGACCAUGGUAUGUGGA - 33
• Evidence: experimental ; cloned [1], RT-PCR [1]

Mature bmo-miR-2731-1-3p

• Accession: MIMAT0053139
• Description: Bombyx mori bmo-miR-2731-1-3p mature miRNA
• Sequence: 74 - UCCACAUCUCCCGAGGUG - 91
• Evidence: experimental ; cloned [1], RT-PCR [1]

References

1. PubMed ID: 19699294
   A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
   "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
   "Genomics (2009) 94:438-444