Stem-loop bmo-mir-2733a-1

Accession

MI0012182

Description

Bombyx mori bmo-mir-2733a-1 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2733a-1
(4 sentences)

Sequence

385572 reads, 3088.0 reads per million, 27 experiments

uuucucucuaauacAGUCAUCACACUCUCAGUUGAUAUguguaacauucuaUCACUGGGUGCAUGAUGAUUGUgguacagagau
..(((((.((.(((((((((((..(.((((((.((((.(((...)))..)))))))))).)..))))))))))).)).))))).

Structure

uu     c  a           CA U      U    -U   u 
  ucucu ua uacAGUCAUCA  C CUCAGU GAUA  gug  
  ||||| || |||||||||||  | |||||| ||||  ||| a
  agaga au gUGUUAGUAGU  G GGGUCA CUau  uac  
-u     c  g           AC U      -    cu   a 

Annotation confidence High

Genome context

dbj|BSVE01000011.1|: 369407-369490 [-]

Clustered miRNAs

17 other miRNAs are < 10 kb from bmo-mir-2733a-1

Mature bmo-miR-2733a-5p

• Accession: MIMAT0012611
• Description: Bombyx mori bmo-miR-2733a-5p mature miRNA
• Sequence: 15 - AGUCAUCACACUCUCAGUUGAUAU - 38
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-2733a-1-3p

• Accession: MIMAT0053220
• Description: Bombyx mori bmo-miR-2733a-1-3p mature miRNA
• Sequence: 52 - UCACUGGGUGCAUGAUGAUUGU - 73
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 19699294
   A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
   "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
   "Genomics (2009) 94:438-444