Stem-loop bmo-mir-2739

Accession

MI0012188

Description

Bombyx mori bmo-mir-2739 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2739
(1 sentences)

Sequence

78 reads, 29 reads per million, 3 experiments

gcugcaccucggGAGAUGUGGAUAUUAUGGUGUGGAGGgauagaaaccgcguggcuuuaauuucaacauaccauggucucguaacuaccagguguggc
(((((((((.((.((.....((.(((((((((((..(((((.(((.((....)).))).)))))..))))))))))).))....)).)))))))))))

Structure

         c  G  AUGUG  U           GA     a   a  g 
gcugcaccu gg AG     GA AUUAUGGUGUG  GGgau gaa cc c
||||||||| || ||     || |||||||||||  ||||| ||| ||  
cggugugga cc uc     cu ugguaccauac  cuuua uuu gg g
         -  a  -aaug  c           aa     a   c  u 

Annotation confidence Not enough data

Genome context

NW_004582029.1: 1198265-1198362 [+]

Mature bmo-miR-2739

• Accession: MIMAT0012617
• Description: Bombyx mori bmo-miR-2739 mature miRNA
• Sequence: 13 - GAGAUGUGGAUAUUAUGGUGUGGAGG - 38
• Evidence: experimental ; cloned [1], RT-PCR [1], SOLID [2]

References

1. PubMed ID: 19699294
   A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
   "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
   "Genomics (2009) 94:438-444


2. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415