miRBase entry: bmo-mir-2744

Stem-loop bmo-mir-2744


Accession
MI0012195
Description
Bombyx mori bmo-mir-2744 precursor miRNA


Sequence

9223 reads, 191.0 reads per million, 34 experiments
ucggcagcagcucagccuugucaucgUCAUCGAAUGCCGGUGGUUGGCCUGaaggcguacagggaggcauaguacgguauucggaUUUGAGAGUCCUAGCUAGucgcca
..(((.((((((.((..((.(((..(((..(((((((((.((.(..((((..............))))..).)))))))))))))).))).))..)))))).)).))).

Structure
uc   a  -    c  cc  g   uc   AU         G  G UG    Gaaggc 
  ggc gc agcu ag  uu uca  gUC  CGAAUGCCG UG U  GCCU      g
  ||| || |||| ||  || |||  |||  ||||||||| || |  ||||       
  ccg uG UCGA UC  GA AGU  Uag  gcuuauggc au a  cgga      u
-a   c  A    -  CU  G   -U   --         -  g ua    gggaca 


Annotation confidence Low
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Genome context
dbj|BSVE01000030.1|: 1407919-1408034 [+]

Database links

Mature bmo-miR-2744-5p

Accession MIMAT0053145
Description Bombyx mori bmo-miR-2744-5p mature miRNA
Sequence 27 - UCAUCGAAUGCCGGUGGUUGGCCUG - 51
Evidence experimental
cloned [1], RT-PCR [1]

Mature bmo-miR-2744-3p

Accession MIMAT0012623
Description Bombyx mori bmo-miR-2744-3p mature miRNA
Sequence 86 - UUUGAGAGUCCUAGCUAG - 103
Evidence experimental
cloned [1], RT-PCR [1]

References

  1. PubMed ID: 19699294
    A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
    "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
    "Genomics (2009) 94:438-444