miRBase entry: bmo-mir-2752

Stem-loop bmo-mir-2752


Accession
MI0012204
Description
Bombyx mori bmo-mir-2752 precursor miRNA


Sequence

3990 reads, 58.0 reads per million, 31 experiments
gggUAACGCCGCGGACUGUCUcaacacgauggccacggagccgucgacguccccgauccagcaguccuggucgguggggacgaaguacggcuccgcggcgaCAGCGACGUCGAUUGACCACUccgccaugguguggacg
..((.((((((((((.((..((((..((((((((.((((((((((..((((((((..((((.....))))....))))))))..).))))))))).)))........))))).)))).)).)))))...)))))..)).

Structure
gg  -A     ---     C  UC    ca     --------   a         - ga        --au    c 
  gU  ACGCC   GCGGA UG  Ucaa  cgaug        gcc cggagccgu c  cguccccg    ccag a
  ||  |||||   ||||| ||  ||||  |||||        ||| ||||||||| |  ||||||||    |||| g
  ca  ugugg   cgccU AC  AGUU  GCUGC        cgg gccucggca g  gcaggggu    gguc u
-g  gg     uac     C  -C    -A     AGCGACag   c         u aa        ggcu    c 


Annotation confidence Low
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Genome context
dbj|BSVE01000029.1|: 10636157-10636295 [-]

Database links

Mature bmo-miR-2752-5p

Accession MIMAT0053149
Description Bombyx mori bmo-miR-2752-5p mature miRNA
Sequence 4 - UAACGCCGCGGACUGUCU - 21
Evidence experimental
cloned [1], RT-PCR [1]

Mature bmo-miR-2752-3p

Accession MIMAT0012632
Description Bombyx mori bmo-miR-2752-3p mature miRNA
Sequence 102 - CAGCGACGUCGAUUGACCACU - 122
Evidence experimental
cloned [1], RT-PCR [1]

References

  1. PubMed ID: 19699294
    A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
    "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
    "Genomics (2009) 94:438-444