miRBase entry: bmo-mir-2752

Stem-loop bmo-mir-2752


Accession
MI0012204
Description
Bombyx mori bmo-mir-2752 precursor miRNA


Sequence

6 reads, 1 reads per million, 3 experiments
ggguaacgccgcggacuguCUCAACACGAUGGCCACGGAgccgucgacguccccgauccagcaguccuggucgguggggacgaaguacggcuccgcggcgacagcgacgucgauugaccacuccgccaugguguggacg
..((.((((((((((.((..((((..((((((((.((((((((((..((((((((..((((.....))))....))))))))..).))))))))).)))........))))).)))).)).)))))...)))))..)).

Structure
gg  -a     ---     c  uC    CA     --------   A         - ga        --au    c 
  gu  acgcc   gcgga ug  UCAA  CGAUG        GCC CGGAgccgu c  cguccccg    ccag a
  ||  |||||   ||||| ||  ||||  |||||        ||| ||||||||| |  ||||||||    |||| g
  ca  ugugg   cgccu ac  aguu  gcugc        cgg gccucggca g  gcaggggu    gguc u
-g  gg     uac     c  -c    -a     agcgacag   c         u aa        ggcu    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004612635.1: 104-242 [+]

Database links

Mature bmo-miR-2752

Accession MIMAT0012632
Description Bombyx mori bmo-miR-2752 mature miRNA
Sequence 20 - CUCAACACGAUGGCCACGGA - 39
Evidence experimental
cloned [1], RT-PCR [1]

References

  1. PubMed ID: 19699294
    A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
    "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
    "Genomics (2009) 94:438-444