Stem-loop dpu-mir-100

Accession

MI0012218

Description

Daphnia pulex dpu-mir-100 precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

2 open access papers mention dpu-mir-100
(9 sentences)

Sequence

aacuuacguugacucgcucgAACCCGUAGAUCCGAACUUGUGUgugaauucaccccaaauucauaauugaugacaucacaaguacgauucuaaggguccaa
...................(.((((.((((..((.(((((((((((((((.......))))))))...........))))))).))..)))).)))).)..

Structure

aacuuacguugacucgcuc A    G    UC  A       -----------        ca 
                   g ACCC UAGA  CG ACUUGUG           Ugugaauu  c
                   | |||| ||||  || |||||||           ||||||||  c
                   c uggg aucu  gc ugaacac           auacuuaa  c
-----------------aa c    a    ua  a       uacaguaguua        ac 

Annotation confidence Not enough data

Genome context

GL732593.1: 446640-446740 [-]

Mature dpu-miR-100

• Accession: MIMAT0012637
• Description: Daphnia pulex dpu-miR-100 mature miRNA
• Sequence: 21 - AACCCGUAGAUCCGAACUUGUGU - 43
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68