Stem-loop dpu-mir-283

Accession

MI0012225

Description

Daphnia pulex dpu-mir-283 precursor miRNA

Literature search

1 open access papers mention dpu-mir-283
(7 sentences)

Sequence

cugcugauggcuucugauacggccAAAUAUCAGCAGGUAAUUCUgggcaguuauuauccuuggacuugauuaaaauacaaggaagaacccagacugccggcugguaucaggccgug
..(((...)))......(((((((..((((((((.((((..((((((......((.((((((...............)))))).)).)))))).)))).))))))))..)))))))

Structure

cugcugauggcuucuga       AA        A    AU      caguua  a      gacuug 
                 uacggcc  AUAUCAGC GGUA  UCUggg      uu uccuug      a
                 |||||||  |||||||| ||||  ||||||      || ||||||      u
                 gugccgg  uauggucg ccgu  agaccc      ag aggaac      u
-----------------       ac        g    -c      -----a  a      auaaaa 

Annotation confidence Not enough data

Genome context

GL732523.1: 1848721-1848836 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dpu-mir-283

Mature dpu-miR-283

• Accession: MIMAT0012644
• Description: Daphnia pulex dpu-miR-283 mature miRNA
• Sequence: 25 - AAAUAUCAGCAGGUAAUUCU - 44
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68