miRBase entry: dpu-mir-263b

Stem-loop dpu-mir-263b

Accession

MI0012231

Description

Daphnia pulex dpu-mir-263b precursor miRNA

Gene family

MIPF0000122; mir-263

Sequence

gugaucCUUGGCACUGGAAGAAUUCACAgagugcauuacgacaggucguggguucccuggugccagagauugc
((((((.((((((((((..((((((((.((.((........))..)))))))))).)))))))))).))))))

Structure

      C          AA        A  -g  cau 
gugauc UUGGCACUGG  GAAUUCAC ga  ug   u
|||||| ||||||||||  |||||||| ||  ||    
cguuag gaccgugguc  cuugggug cu  ac   a
      a          -c        -  gg  agc

Annotation confidence Not enough data

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Genome context

GL732609.1: 475811-475883 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dpu-mir-263b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpu-miR-263b

Accession	MIMAT0012650
Description	Daphnia pulex dpu-miR-263b mature miRNA
Sequence	7 - CUUGGCACUGGAAGAAUUCACA - 28
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68