Stem-loop isc-bantam

Accession

MI0012259

Description

Ixodes scapularis isc-bantam precursor miRNA

Literature search

1 open access papers mention isc-bantam
(3 sentences)

Sequence

gccgaagaaacgccagacaaaacugguuuucacaaugaucguccagauggaccugaagucUGAGAUCAUUGUGAAAGCUGAUUuuguugauucagagcuuc
...((((........(((((((.(((((((((((((((((...(((((.........))))).))))))))))))))))).))))))).........))))

Structure

gcc    -aaacgcca       c                 guc     gga 
   gaag         gacaaaa ugguuuucacaaugauc   cagau   c
   ||||         ||||||| |||||||||||||||||   |||||   c
   cuuc         uuguuUU GUCGAAAGUGUUACUAG   GUcug   u
---    gagacuuag       A                 --A     aag 

Annotation confidence Not enough data

Genome context

DS612599: 38772-38872 [-]

Mature isc-bantam

• Accession: MIMAT0012679
• Description: Ixodes scapularis isc-bantam mature miRNA
• Sequence: 61 - UGAGAUCAUUGUGAAAGCUGAUU - 83
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68