Stem-loop isc-mir-219

Accession

MI0012270

Description

Ixodes scapularis isc-mir-219 precursor miRNA

Literature search

1 open access papers mention isc-mir-219
(1 sentences)

Sequence

acggaaccaguuccaagcugUGAUUGUCCAAACGCAAUUCUUgugcgaucguuaccaagaacugugucgggacaucaggguuuggaacugauugcgacaca
.((.((.((((((((((((.((((.((((..(((((.((((((.((....))...)))))).)))))..)))))))).)))))))))))).)).)).....

Structure

----a  g  c            g    U    AA     A      --u  g 
     cg aa caguuccaagcu UGAU GUCC  ACGCA UUCUUg   gc a
     || || |||||||||||| |||| ||||  ||||| ||||||   ||  
     gc uu gucaagguuugg acua cagg  ugugu aagaac   ug u
acaca  g  a            g    -    gc     c      cau  c 

Annotation confidence Low

Genome context

DS658596: 21107-21207 [-]

Mature isc-miR-219

• Accession: MIMAT0012690
• Description: Ixodes scapularis isc-miR-219 mature miRNA
• Sequence: 21 - UGAUUGUCCAAACGCAAUUCUU - 42
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68