Stem-loop bmo-mir-308

Accession

MI0012296

Description

Bombyx mori bmo-mir-308 precursor miRNA

Sequence

49498 reads, 9231 reads per million, 3 experiments

cguuuccacgCGUGGUAUUAUUCUUGUGAAUGUguuuuagcuacAAUCACAGGAUAAUACUGCGAGuggcgguguc
.....((((.(((((((((((.(((((((.(((((....)).))).)))))))))))))))))).)))).......

Structure

--cguuu    g           U       A   -  u 
       ccac CGUGGUAUUAU CUUGUGA UGU gu u
       |||| ||||||||||| ||||||| ||| ||  
       gguG GCGUCAUAAUA GGACACU Aca cg u
cuguggc    A           -       A   u  a 

Annotation confidence Medium

Genome context

NW_004582010.1: 8094179-8094254 [-]

Mature bmo-miR-308-5p

• Accession: MIMAT0013604
• Description: Bombyx mori bmo-miR-308-5p mature miRNA
• Sequence: 11 - CGUGGUAUUAUUCUUGUGAAUGU - 33
• Evidence: experimental ; Illumina [1], SOLID [2]

Mature bmo-miR-308-3p

• Accession: MIMAT0013605
• Description: Bombyx mori bmo-miR-308-3p mature miRNA
• Sequence: 45 - AAUCACAGGAUAAUACUGCGAG - 66
• Evidence: experimental ; Illumina [1], SOLID [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415