Stem-loop bmo-mir-2733c

Accession

MI0012306

Description

Bombyx mori bmo-mir-2733c precursor miRNA

Literature search

2 open access papers mention bmo-mir-2733c
(5 sentences)

Sequence

46 reads, 9 reads per million, 3 experiments

gauugucacugucaguugucacuaucgccagugucagugucguaauucugUCACUGGGAGAGUGAUGAUUGCcggugacgau
.((((((((((.(((((((((((.((.((((((.(((.((....)).))).)))))))).))))))))))).))))))))))

Structure

g          u           a  g      u   u  c 
 auugucacug caguugucacu uc ccagug cag gu g
 |||||||||| ||||||||||| || |||||| ||| ||  
 uagcaguggc GUUAGUAGUGA AG GGUCAC guc ua u
-          C           G  -      U   u  a 

Annotation confidence Not enough data

Genome context

NW_004581684.1: 353724-353805 [-]

Clustered miRNAs

12 other miRNAs are < 10 kb from bmo-mir-2733c

Mature bmo-miR-2733c

• Accession: MIMAT0013619
• Description: Bombyx mori bmo-miR-2733c mature miRNA
• Sequence: 51 - UCACUGGGAGAGUGAUGAUUGC - 72
• Evidence: experimental ; Illumina [1], SOLID [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415