Stem-loop bmo-mir-9d

Accession

MI0012307

Description

Bombyx mori bmo-mir-9d precursor miRNA

Literature search

4 open access papers mention bmo-mir-9d
(9 sentences)

Sequence

11 reads, 2 reads per million, 2 experiments

gcucaauuggaguauuuggugauucagcugaugugaugaaaacuuuuuaauucAUAAAGCUAAUUCACUGAGUGUucgaguugag
.(((((((.(((((((((((((...((((..((((((((((...)))))..))))).))))...))))))))))))).)))))))

Structure

g       g             uuc    ga     --     a 
 cucaauu gaguauuugguga   agcu  uguga  ugaaa  
 ||||||| |||||||||||||   ||||  |||||  ||||| c
 gaguuga cuUGUGAGUCACU   UCGA  AUAcu  auuuu  
-       g             UAA    -A     ua     u 

Annotation confidence Not enough data

Genome context

NW_004581684.1: 354559-354643 [-]

Clustered miRNAs

12 other miRNAs are < 10 kb from bmo-mir-9d

Mature bmo-miR-9d

• Accession: MIMAT0013620
• Description: Bombyx mori bmo-miR-9d mature miRNA
• Sequence: 54 - AUAAAGCUAAUUCACUGAGUGU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148