Stem-loop bmo-mir-2763

Accession

MI0012317

Description

Bombyx mori bmo-mir-2763 precursor miRNA

Literature search

2 open access papers mention bmo-mir-2763
(7 sentences)

Sequence

16 reads, 3 reads per million, 2 experiments

ggcaauguacUGCAAAGUAGUGAACAUAAUUUAUcgugagauuuauuauuagaUAUUAUGCUCAUUUCUUUGGAUauguuguacg
.((((((((.(.(((((.(((((.((((((.....((((......)))).....)))))).))))).))))).)))))))))...

Structure

--g        c G     U     A      UUAUc    ga 
   gcaaugua U CAAAG AGUGA CAUAAU     guga  u
   |||||||| | ||||| ||||| ||||||     ||||   
   uguuguaU A GUUUC UUACU GUAUUA     uauu  u
gca        - G     U     C      Uagau    au 

Annotation confidence Low

Genome context

NW_004581731.1: 1485728-1485812 [+]

Mature bmo-miR-2763-5p

• Accession: MIMAT0013637
• Description: Bombyx mori bmo-miR-2763-5p mature miRNA
• Sequence: 11 - UGCAAAGUAGUGAACAUAAUUUAU - 34
• Evidence: experimental ; Illumina [1-2], SOLID [3]

Mature bmo-miR-2763-3p

• Accession: MIMAT0013638
• Description: Bombyx mori bmo-miR-2763-3p mature miRNA
• Sequence: 54 - UAUUAUGCUCAUUUCUUUGGAU - 75
• Evidence: experimental ; Illumina [1-2], SOLID [3]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415


3. PubMed ID: 20089182
   Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
   Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R
   BMC Genomics (2010) 11:52