Stem-loop bmo-mir-2772b

Accession

MI0012327

Description

Bombyx mori bmo-mir-2772b precursor miRNA

Literature search

1 open access papers mention bmo-mir-2772b
(1 sentences)

Sequence

33114 reads, 692.0 reads per million, 34 experiments

uUCUUUGCCUUAUCUCUAAACucaaagugguaccagcaguguggauggucaucuggucguugccgUGUUUGAGUUCUGGAUCUGGAgcguaugugg
.......((..(((.(..((((((((.(((((((((..(((........))))))))....))))..))))))))..))))..))...........

Structure

----uUCUUUG  UU   U UA        -g    ----     ca   ugg 
           CC  AUC C  AACucaaa  uggu    accag  gug   a
           ||  ||| |  ||||||||  ||||    |||||  |||    
           GG  UAG G  UUGAGUUU  gccg    ugguc  uac   u
gguguaugcgA  UC   - UC        GU    uugc     --   ugg 

Annotation confidence Medium

Genome context

dbj|BSVE01000024.1|: 13326593-13326688 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-2772b

Mature bmo-miR-2772b-5p

• Accession: MIMAT0053160
• Description: Bombyx mori bmo-miR-2772b-5p mature miRNA
• Sequence: 2 - UCUUUGCCUUAUCUCUAAAC - 21
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2772b-3p

• Accession: MIMAT0013653
• Description: Bombyx mori bmo-miR-2772b-3p mature miRNA
• Sequence: 66 - UGUUUGAGUUCUGGAUCUGGA - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148