Stem-loop bmo-mir-2778a-1

Accession

MI0012338

Description

Bombyx mori bmo-mir-2778a-1 precursor miRNA

Sequence

15324299 reads, 78520.0 reads per million, 34 experiments

cacggcaaaaGUUUUUUUGCAUAUCCUGCACAguuucaguucucgCAGAGUACGCAAAAAAACAAUUuugacgugag
((((.(((((((((((((((.(((.((((..((........)).)))).))).))))))))))..))))).))))..

Structure

--    g     --          A   C    AC  uuu 
  cacg caaaa  GUUUUUUUGC UAU CUGC  Ag   c
  |||| |||||  |||||||||| ||| ||||  ||    
  gugc guuUU  CAAAAAAACG AUG GACg  uc   a
ga    a     AA          C   A    -c  uug 

Annotation confidence High

Genome context

dbj|BSVE01000028.1|: 6308790-6308866 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from bmo-mir-2778a-1

Mature bmo-miR-2778a-5p

• Accession: MIMAT0013664
• Description: Bombyx mori bmo-miR-2778a-5p mature miRNA
• Sequence: 11 - GUUUUUUUGCAUAUCCUGCACA - 32
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2778a-3p

• Accession: MIMAT0013665
• Description: Bombyx mori bmo-miR-2778a-3p mature miRNA
• Sequence: 46 - CAGAGUACGCAAAAAAACAAUU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148