Stem-loop bmo-mir-2780a-1

Accession

MI0012345

Description

Bombyx mori bmo-mir-2780a-1 precursor miRNA

Sequence

12936 reads, 285.0 reads per million, 34 experiments

ccacggugaaAAGGGUGUUAAAUGAAGACUUAuuagggcuucgggcauaucgaagaaaaacaggaaaucguuUGAAUGCUCGUCUAAUGGA
(((....((...(((((((((((((...(((.......((((((.....))))))......)))...))))))).)))))).))...))).

Structure

-   cggu  aAA      -       AGA   Auuaggg      g 
 cca    ga   GGGUGU UAAAUGA   CUU       cuucgg c
 |||    ||   |||||| |||||||   |||       |||||| a
 GGU    CU   CUCGUA GUuugcu   gga       gaagcu u
A   -AAU  --G      A       aaa   -caaaaa      a 

Annotation confidence Medium

Genome context

dbj|BSVE01000007.1|: 5322537-5322627 [-]

Mature bmo-miR-2780a-5p

• Accession: MIMAT0013669
• Description: Bombyx mori bmo-miR-2780a-5p mature miRNA
• Sequence: 11 - AAGGGUGUUAAAUGAAGACUUA - 32
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2780a-3p

• Accession: MIMAT0013670
• Description: Bombyx mori bmo-miR-2780a-3p mature miRNA
• Sequence: 73 - UGAAUGCUCGUCUAAUGGA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148