Stem-loop bmo-mir-2780a-1

Accession

MI0012345

Description

Bombyx mori bmo-mir-2780a-1 precursor miRNA

Sequence

909 reads, 182 reads per million, 3 experiments

ccacggugaaAAGGGUGUUAAAUGAAGACUUAUuagggcuucgggcauaucgaagaaaaacaggaAAUCGUUUGAAUGCUCGUCUAAugga
(((....((...(((((((((((((...(((.......((((((.....))))))......)))...))))))).)))))).))...))).

Structure

-   cggu  aAA      -       AGA   AUuaggg      g 
 cca    ga   GGGUGU UAAAUGA   CUU       cuucgg c
 |||    ||   |||||| |||||||   |||       |||||| a
 ggu    CU   CUCGUA GUUUGCU   gga       gaagcu u
a   -AAU  --G      A       AAa   -caaaaa      a 

Annotation confidence Not enough data

Genome context

NW_004582022.1: 1297811-1297901 [-]

Mature bmo-miR-2780a-3p

• Accession: MIMAT0013670
• Description: Bombyx mori bmo-miR-2780a-3p mature miRNA
• Sequence: 66 - AAUCGUUUGAAUGCUCGUCUAA - 87
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2780a-5p

• Accession: MIMAT0013669
• Description: Bombyx mori bmo-miR-2780a-5p mature miRNA
• Sequence: 11 - AAGGGUGUUAAAUGAAGACUUAU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148