miRBase entry: bmo-mir-2778a-2

Stem-loop bmo-mir-2778a-2


Accession
MI0012352
Description
Bombyx mori bmo-mir-2778a-2 precursor miRNA


Sequence

15314920 reads, 78376.0 reads per million, 34 experiments
acucacggcaaaaGUUUUUUUGUAUAUCCUGCACAguuucaguucucgCAGAGUACGCAAAAAAACAAUUuugacgugag
.((((((.(((((((((((((((.(((.((((..((........)).)))).))).))))))))))..))))).))))))

Structure
a      g     --          A   C    AC  uuu 
 cucacg caaaa  GUUUUUUUGU UAU CUGC  Ag   c
 |||||| |||||  |||||||||| ||| ||||  ||    
 gagugc guuUU  CAAAAAAACG AUG GACg  uc   a
-      a     AA          C   A    -c  uug 


Annotation confidence High
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Genome context
dbj|BSVE01000028.1|: 6310602-6310681 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from bmo-mir-2778a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2778a-2-5p

Accession MIMAT0015305
Description Bombyx mori bmo-miR-2778a-2-5p mature miRNA
Sequence 14 - GUUUUUUUGUAUAUCCUGCACA - 35
Evidence experimental
Illumina [1]

Mature bmo-miR-2778a-3p

Accession MIMAT0013665
Description Bombyx mori bmo-miR-2778a-3p mature miRNA
Sequence 49 - CAGAGUACGCAAAAAAACAAUU - 70
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148