Stem-loop bmo-mir-2788

Accession

MI0012361

Description

Bombyx mori bmo-mir-2788 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2788
(2 sentences)

Sequence

556 reads, 15.0 reads per million, 23 experiments

gccguagaacUGGGGUUUCAAAGCGGUAUGUGccuucgauuaugCAAUGCCCUUGGAAAUCCCAAAcgugcuggcg
((((((....(((((((((.(((.(((((.(((..........))))))))))).)))))))))....))).))).

Structure

-   -   gaac         A   C     G   cuuc 
 gcc gua    UGGGGUUUC AAG GGUAU UGc    g
 ||| |||    ||||||||| ||| ||||| |||     
 cgg cgu    ACCCUAAAG UUC CCGUA ACg    a
g   u   gcAA         G   -     -   uauu 

Annotation confidence High

Genome context

dbj|BSVE01000017.1|: 2769372-2769447 [+]

Mature bmo-miR-2788-5p

• Accession: MIMAT0013685
• Description: Bombyx mori bmo-miR-2788-5p mature miRNA
• Sequence: 11 - UGGGGUUUCAAAGCGGUAUGUG - 32
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2788-3p

• Accession: MIMAT0053167
• Description: Bombyx mori bmo-miR-2788-3p mature miRNA
• Sequence: 45 - CAAUGCCCUUGGAAAUCCCAAA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148