miRBase entry: bmo-mir-2789

Stem-loop bmo-mir-2789


Accession
MI0012362
Description
Bombyx mori bmo-mir-2789 precursor miRNA


Sequence

49 reads, 1.0 reads per million, 22 experiments
ccguguuuauuucuguacucuuuauuuucugucacaguuguucugucguggaaaugucugucGUAGAAAGUUUGGAGGUGGAUucguacagcg
.(((((.....(((...((((..((((((((.(((((...((((.....))))....)))).)))))))))..))))..))).....))).))

Structure
c  -   uuauu   gua    uu        u -    -uug    g 
 cg ugu     ucu   cucu  auuuucug c acag    uucu u
 || |||     |||   ||||  |||||||| | ||||    |||| c
 gc aca     AGG   GAGG  UGAAAGAU G uguc    aagg g
-  g   ugcuU   -UG    UU        - c    ugua    u 


Annotation confidence Not enough data
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Genome context
dbj|BSVE01000017.1|: 2344705-2344797 [+]

Database links

Mature bmo-miR-2789-3p

Accession MIMAT0013686
Description Bombyx mori bmo-miR-2789-3p mature miRNA
Sequence 63 - GUAGAAAGUUUGGAGGUGGAU - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148