Stem-loop bmo-mir-2797a

Accession

MI0012370

Description

Bombyx mori bmo-mir-2797a precursor miRNA

Sequence

5627 reads, 86.0 reads per million, 23 experiments

uguugugaucAUAAGUAGGUUUUAUUCGACUUuguucuauauucaagUCGCGUGAAUCCUACUUUUGAUgacugcga
(((.((.((((.(((((((.(((((.((((((.(........).)))))).))))).))))))).)))).)).))).

Structure

-   u  g    U       U     U      u uuc 
 ugu gu aucA AAGUAGG UUUAU CGACUU g   u
 ||| || |||| ||||||| ||||| |||||| |    
 gcg ca UAGU UUCAUCC AAGUG GCUgaa u   a
a   u  g    U       U     C      c uau 

Annotation confidence High

Genome context

dbj|BSVE01000027.1|: 11553810-11553886 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from bmo-mir-2797a

Mature bmo-miR-2797a-5p

• Accession: MIMAT0013698
• Description: Bombyx mori bmo-miR-2797a-5p mature miRNA
• Sequence: 11 - AUAAGUAGGUUUUAUUCGACUU - 32
• Evidence: experimental ; Illumina [1], SOLID [2]

Mature bmo-miR-2797a-3p

• Accession: MIMAT0053169
• Description: Bombyx mori bmo-miR-2797a-3p mature miRNA
• Sequence: 48 - UCGCGUGAAUCCUACUUUUGAU - 69
• Evidence: experimental ; Illumina [1], SOLID [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415