miRBase entry: bmo-mir-2801

Stem-loop bmo-mir-2801


Accession
MI0012377
Description
Bombyx mori bmo-mir-2801 precursor miRNA


Sequence

64 reads, 15 reads per million, 3 experiments
cacauguuuaGUGGAAUCUUGUGACUUUGUAAAGugcuugcaaucaggcaugcgugugauggcugacagagguuuuaagcaugugg
((((((((((...(((((((((.(((.......(((((((....))))))).........)).).))).)))))))))))))))).

Structure
-          GUG      -   G -  --UUGUAAA       c 
 cacauguuua   GAAUCU UGU A CU         Gugcuug a
 ||||||||||   |||||| ||| | ||         |||||||  
 guguacgaau   uuugga aca u gg         uacggac a
g          ---      g   g c  uagugugcg       u 


Annotation confidence Not enough data
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Genome context
NW_004586827.1: 393-478 [+]

Database links

Mature bmo-miR-2801

Accession MIMAT0013705
Description Bombyx mori bmo-miR-2801 mature miRNA
Sequence 11 - GUGGAAUCUUGUGACUUUGUAAAG - 34
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148