Stem-loop bmo-mir-2801

Accession

MI0012377

Description

Bombyx mori bmo-mir-2801 precursor miRNA

Sequence

19889 reads, 396.0 reads per million, 34 experiments

cacauguuuaGUGGAAUCUUGUGACUUUGUAAAGugcuugcaaucaggcaugcgugugAUGGCUGACAGAGGUUUUAAGCAugugg
((((((((((...(((((((((.(((.......(((((((....))))))).........)).).))).)))))))))))))))).

Structure

-          GUG      -   G -  --UUGUAAA       c 
 cacauguuua   GAAUCU UGU A CU         Gugcuug a
 ||||||||||   |||||| ||| | ||         |||||||  
 guguACGAAU   UUUGGA ACA U GG         uacggac a
g          ---      G   G C  UAgugugcg       u 

Annotation confidence Medium

Genome context

dbj|BSVE01000016.1|: 7044492-7044577 [-]

Mature bmo-miR-2801-5p

• Accession: MIMAT0013705
• Description: Bombyx mori bmo-miR-2801-5p mature miRNA
• Sequence: 11 - GUGGAAUCUUGUGACUUUGUAAAG - 34
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2801-3p

• Accession: MIMAT0053173
• Description: Bombyx mori bmo-miR-2801-3p mature miRNA
• Sequence: 59 - AUGGCUGACAGAGGUUUUAAGCA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148