Stem-loop bmo-mir-2780a-2

Accession

MI0012386

Description

Bombyx mori bmo-mir-2780a-2 precursor miRNA

Sequence

26598 reads, 577.0 reads per million, 34 experiments

ccacggugaaAAGGGUGUUAAAUGAAGACUUAuggcuucgggcaugucgaagAAAAACAGGACAUCGUUUGAAUGCUcgucuaaugga
(((....((...(((((((((((((.(.(((.(..((((((.....))))))..)...))).).))))))).)))))).))...))).

Structure

-   cggu  aAA      -       A A   --A gg      g 
 cca    ga   GGGUGU UAAAUGA G CUU   u  cuucgg c
 |||    ||   |||||| ||||||| | |||   |  |||||| a
 ggu    cu   cUCGUA GUUUGCU C GGA   A  gaagcu u
a   -aau  --g      A       A A   CAA AA      g 

Annotation confidence Medium

Genome context

dbj|BSVE01000012.1|: 11930395-11930482 [-]

Mature bmo-miR-2780a-5p

• Accession: MIMAT0013669
• Description: Bombyx mori bmo-miR-2780a-5p mature miRNA
• Sequence: 11 - AAGGGUGUUAAAUGAAGACUUA - 32
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2780a-2-3p

• Accession: MIMAT0053181
• Description: Bombyx mori bmo-miR-2780a-2-3p mature miRNA
• Sequence: 53 - AAAAACAGGACAUCGUUUGAAUGCU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148