Stem-loop bmo-mir-2780a-2

Accession

MI0012386

Description

Bombyx mori bmo-mir-2780a-2 precursor miRNA

Sequence

1075 reads, 182 reads per million, 3 experiments

ccacggugaaAAGGGUGUUAAAUGAAGACUUAUggcuucgggcaugucgaagaaaaacaggacaucguuugaaugcucgucuaaugga
(((....((...(((((((((((((.(.(((.(..((((((.....))))))..)...))).).))))))).)))))).))...))).

Structure

-   cggu  aAA      -       A A   --A gg      g 
 cca    ga   GGGUGU UAAAUGA G CUU   U  cuucgg c
 |||    ||   |||||| ||||||| | |||   |  |||||| a
 ggu    cu   cucgua guuugcu c gga   a  gaagcu u
a   -aau  --g      a       a a   caa aa      g 

Annotation confidence Low

Genome context

NW_004581758.1: 328891-328978 [-]

Mature bmo-miR-2780a-5p

• Accession: MIMAT0013669
• Description: Bombyx mori bmo-miR-2780a-5p mature miRNA
• Sequence: 11 - AAGGGUGUUAAAUGAAGACUUAU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148