Stem-loop bmo-mir-2808a-1

Accession

MI0012388

Description

Bombyx mori bmo-mir-2808a-1 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2808a-1
(2 sentences)

Sequence

78374 reads, 1686.0 reads per million, 34 experiments

agccgugcuuCGUAGAAUCUACCAUCGGAUCGgaaacgcgauccacugagaagaUCCGGCGAGAAACUCAGUGGGCUG
((((..(((((((.(.((((.(((..((((((......))))))..)).).)))).).)))).......))).)))).

Structure

-    gu   -------    A A    A -  UC      ga 
 agcc  gcu       uCGU G AUCU C CA  GGAUCG  a
 ||||  |||       |||| | |||| | ||  ||||||   
 UCGG  UGA       AGCG C Uaga g gu  ccuagc  a
G    -G   CUCAAAG    G C    a a  ca      gc 

Annotation confidence Low

Genome context

dbj|BSVE01000013.1|: 15766063-15766140 [+]

Mature bmo-miR-2808a-5p

• Accession: MIMAT0013711
• Description: Bombyx mori bmo-miR-2808a-5p mature miRNA
• Sequence: 11 - CGUAGAAUCUACCAUCGGAUCG - 32
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2808a-1-3p

• Accession: MIMAT0053183
• Description: Bombyx mori bmo-miR-2808a-1-3p mature miRNA
• Sequence: 55 - UCCGGCGAGAAACUCAGUGGGCUG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148