Stem-loop bmo-mir-2809

Accession

MI0012389

Description

Bombyx mori bmo-mir-2809 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2809
(2 sentences)

Sequence

4376 reads, 85.0 reads per million, 34 experiments

uacucgaagcGAAACAGCGAACGGAUCACCUGAUgcgaaccggaagaagCGAAUUGAGAGUUUUAAAGUGUUUGuugaguguuuuaagca
..((.((((((...(((((((((............(((..((.......))..)))............)))))))))..)))))).))..

Structure

ua  c      AAA         GAUCACCUGAUg   ac  ga 
  cu gaagcG   CAGCGAACG            cga  cg  a
  || ||||||   |||||||||            |||  ||  g
  ga uuuugu   guuGUUUGU            GUU  GC  a
ac  a      -ga         GAAAUUUUGAGA   AA  ga 

Annotation confidence Medium

Genome context

dbj|BSVE01000013.1|: 11912307-11912396 [+]

Mature bmo-miR-2809-5p

• Accession: MIMAT0013717
• Description: Bombyx mori bmo-miR-2809-5p mature miRNA
• Sequence: 11 - GAAACAGCGAACGGAUCACCUGAU - 34
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2809-3p

• Accession: MIMAT0053184
• Description: Bombyx mori bmo-miR-2809-3p mature miRNA
• Sequence: 50 - CGAAUUGAGAGUUUUAAAGUGUUUG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148