Stem-loop bmo-mir-2780a-3

Accession

MI0012406

Description

Bombyx mori bmo-mir-2780a-3 precursor miRNA

Sequence

10336 reads, 222.0 reads per million, 34 experiments

ccacggugaaAAGGGUGUUAAAUGAAGACUUAuggcuucggucauaucgaaguuAAACAGGACAUCGUUUGAAUGCUcgucaaaugga
(((...(((...(((((((((((((.(.(((.((((((((((...))))))))))...))).).))))))).)))))).)))..))).

Structure

-   cgg   aAA      -       A A   --A          c 
 cca   uga   GGGUGU UAAAUGA G CUU   uggcuucggu  
 |||   |||   |||||| ||||||| | |||   |||||||||| a
 ggu   acu   cUCGUA GUUUGCU C GGA   Auugaagcua  
a   -aa   --g      A       A A   CAA          u 

Annotation confidence Medium

Genome context

dbj|BSVE01000001.1|: 7000898-7000985 [+]

Mature bmo-miR-2780a-5p

• Accession: MIMAT0013669
• Description: Bombyx mori bmo-miR-2780a-5p mature miRNA
• Sequence: 11 - AAGGGUGUUAAAUGAAGACUUA - 32
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2780a-3-3p

• Accession: MIMAT0053182
• Description: Bombyx mori bmo-miR-2780a-3-3p mature miRNA
• Sequence: 55 - AAACAGGACAUCGUUUGAAUGCU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148