Stem-loop bmo-mir-2780a-3

Accession

MI0012406

Description

Bombyx mori bmo-mir-2780a-3 precursor miRNA

Sequence

801 reads, 162 reads per million, 3 experiments

ccacggugaaAAGGGUGUUAAAUGAAGACUUAUggcuucggucauaucgaaguuaaacaggacaucguuugaaugcucgucaaaugga
(((...(((...(((((((((((((.(.(((.((((((((((...))))))))))...))).).))))))).)))))).)))..))).

Structure

-   cgg   aAA      -       A A   --A          c 
 cca   uga   GGGUGU UAAAUGA G CUU   Uggcuucggu  
 |||   |||   |||||| ||||||| | |||   |||||||||| a
 ggu   acu   cucgua guuugcu c gga   auugaagcua  
a   -aa   --g      a       a a   caa          u 

Annotation confidence Not enough data

Genome context

NW_004582015.1: 1839171-1839258 [+]

Mature bmo-miR-2780a-5p

• Accession: MIMAT0013669
• Description: Bombyx mori bmo-miR-2780a-5p mature miRNA
• Sequence: 11 - AAGGGUGUUAAAUGAAGACUUAU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148