Stem-loop bmo-mir-2780b-1

Accession

MI0012415

Description

Bombyx mori bmo-mir-2780b-1 precursor miRNA

Sequence

1114 reads, 194 reads per million, 3 experiments

ccacggugaaAAGGGUGUUAAAUGAAGACUUAAggcuucgggcauaucgaagaaaaacaggacaucguuugaaugcucgucuaaugga
(((....((...(((((((((((((.(.(((....((((((.....))))))......))).).))))))).)))))).))...))).

Structure

-   cggu  aAA      -       A A   --AAgg      g 
 cca    ga   GGGUGU UAAAUGA G CUU      cuucgg c
 |||    ||   |||||| ||||||| | |||      |||||| a
 ggu    cu   cucgua guuugcu c gga      gaagcu u
a   -aau  --g      a       a a   caaaaa      a 

Annotation confidence Low

Genome context

NW_004581873.1: 20651-20738 [+]

Mature bmo-miR-2780b

• Accession: MIMAT0013732
• Description: Bombyx mori bmo-miR-2780b mature miRNA
• Sequence: 11 - AAGGGUGUUAAAUGAAGACUUAA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148