Stem-loop bmo-mir-2780b-1

Accession

MI0012415

Description

Bombyx mori bmo-mir-2780b-1 precursor miRNA

Sequence

28598 reads, 625.0 reads per million, 34 experiments

ccacggugaaAAGGGUGUUAAAUGAAGACUUAAggcuucgggcauaucgaagAAAAACAGGACAUCGUUUGAAUGCUcgucuaaugga
(((....((...(((((((((((((.(.(((....((((((.....))))))......))).).))))))).)))))).))...))).

Structure

-   cggu  aAA      -       A A   --AAgg      g 
 cca    ga   GGGUGU UAAAUGA G CUU      cuucgg c
 |||    ||   |||||| ||||||| | |||      |||||| a
 ggu    cu   cUCGUA GUUUGCU C GGA      gaagcu u
a   -aau  --g      A       A A   CAAAAA      a 

Annotation confidence Medium

Genome context

dbj|BSVE01000024.1|: 5350381-5350468 [+]

Mature bmo-miR-2780b-5p

• Accession: MIMAT0013732
• Description: Bombyx mori bmo-miR-2780b-5p mature miRNA
• Sequence: 11 - AAGGGUGUUAAAUGAAGACUUAA - 33
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2780b-3p

• Accession: MIMAT0053191
• Description: Bombyx mori bmo-miR-2780b-3p mature miRNA
• Sequence: 53 - AAAAACAGGACAUCGUUUGAAUGCU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148