miRBase entry: bmo-mir-2824

Dead hairpin entry

Stem-loop bmo-mir-2824


Accession
MI0012419
Description
Bombyx mori bmo-mir-2824 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1098 reads, 28.0 reads per million, 32 experiments
cacgagagcUGGUACUGUGCCAGAAAUUGGAUCGUCCugugaagccgagaugucauggccagcgugAACUUCAAACCGCCACAGGUAACCACUcugcgau
..((((((((((((...))))))....(((.....((((((..((.(.((.((((((.....)))).)).))...).))))))))...))))))).))..

Structure
ca  -    cUGGUACUGUGCCAGAAAU   AUCGU      aa  c --a  u  -    g 
  cg agag                   UGG     CCugug  gc g   ga gu caug c
  || ||||                   |||     ||||||  || |   || || |||| c
  gc ucUC                   ACC     GGACAC  CG C   CU CA gugc a
ua  g    -------------------   --AAU      --  C AAA  U  A    g