Stem-loop bmo-mir-2825

Accession

MI0012420

Description

Bombyx mori bmo-mir-2825 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2825
(1 sentences)

Sequence

360 reads, 8.0 reads per million, 30 experiments

aagugcuggagcagcuuucagauugggauaaugaggaUACUGAUGGAGACGAAGGuccaucaggaUCACGAAGAAGCUAUUGCCGUAUug
.(((((.(.((.((((((.................((..((((((((........))))))))..)).....)))))).)).).))))).

Structure

a     u g  c      cagauugggauaaugag  UA        GAC 
 agugc g ag agcuuu                 ga  CUGAUGGA   G
 ||||| | || ||||||                 ||  ||||||||    
 uUAUG C UU UCGAAG                 CU  gacuaccu   A
g     C G  A      ------------AAGCA  ag        GGA 

Annotation confidence Low

Genome context

dbj|BSVE01000027.1|: 2045328-2045417 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-2825

Mature bmo-miR-2825-5p

• Accession: MIMAT0053194
• Description: Bombyx mori bmo-miR-2825-5p mature miRNA
• Sequence: 38 - UACUGAUGGAGACGAAGG - 55
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2825-3p

• Accession: MIMAT0013736
• Description: Bombyx mori bmo-miR-2825-3p mature miRNA
• Sequence: 66 - UCACGAAGAAGCUAUUGCCGUAU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148