Stem-loop bmo-mir-2825

Accession

MI0012420

Description

Bombyx mori bmo-mir-2825 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2825
(1 sentences)

Sequence

27 reads, 7 reads per million, 3 experiments

aagugcuggagcagcuuucagauugggauaaugaggauacugauggagacgaagguccauCAGGAUCACGAAGAAGCUAUugccguauug
.(((((.(.((.((((((.................((..((((((((........))))))))..)).....)))))).)).).))))).

Structure

a     u g  c      cagauugggauaaugag  ua        gac 
 agugc g ag agcuuu                 ga  cugaugga   g
 ||||| | || ||||||                 ||  ||||||||    
 uuaug c uU UCGAAG                 CU  GACuaccu   a
g     c g  A      ------------AAGCA  AG        gga 

Annotation confidence Not enough data

Genome context

NW_004582032.1: 1982746-1982835 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-2825

Mature bmo-miR-2825

• Accession: MIMAT0013736
• Description: Bombyx mori bmo-miR-2825 mature miRNA
• Sequence: 61 - CAGGAUCACGAAGAAGCUAU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148