Stem-loop bmo-mir-2828

Accession

MI0012424

Description

Bombyx mori bmo-mir-2828 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2828
(1 sentences)

Sequence

114 reads, 27 reads per million, 3 experiments

uucacaacugAUAUUCGAUAUGUGAACGGUUccgagaacguaguugcggacuucuuaucgcgcauagagacuguaacguguuccacgaacaucgacua
..........(((.((..((((((..((((...(((..(((....)))..)))...))))))))))..)).)))..(((((((...))))).))....

Structure

--------------uucacaacug   U  GA      AA    Ucc   aa   a 
                        AUA UC  UAUGUG  CGGU   gag  cgu g
                        ||| ||  ||||||  ||||   |||  |||  
                        ugu ag  auacgc  gcua   uuc  gcg u
aucagcuacaagcaccuugugcaa   c  ag      --    uuc   ag   u 

Annotation confidence Not enough data

Genome context

NW_004581767.1: 584242-584339 [+]

Mature bmo-miR-2828

• Accession: MIMAT0013740
• Description: Bombyx mori bmo-miR-2828 mature miRNA
• Sequence: 11 - AUAUUCGAUAUGUGAACGGUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148