miRBase entry: bmo-mir-2830-1

Stem-loop bmo-mir-2830-1


Accession
MI0012427
Description
Bombyx mori bmo-mir-2830-1 precursor miRNA


Sequence

743 reads, 19.0 reads per million, 28 experiments
gaauggaggagugcggccuggggcagccgcugaacccuugguucAGCGACUAUCUCAGGGCGCGCUcuuaucgugu
..(((((((((((((.(((((((.((.(((((((((...))))))))).)).))))))).))))))))).))))..

Structure
ga    -         g       c  c         c 
  augg aggagugcg ccugggg ag cgcugaacc  
  |||| ||||||||| ||||||| || ||||||||| u
  ugcu uucUCGCGC GGACUCU UC GCGAcuugg  
ug    a         G       A  A         u 


Annotation confidence Not enough data
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Genome context
dbj|BSVE01000025.1|: 602178-602253 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-2830-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2830-3p

Accession MIMAT0013743
Description Bombyx mori bmo-miR-2830-3p mature miRNA
Sequence 45 - AGCGACUAUCUCAGGGCGCGCU - 66
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148