miRBase entry: bmo-mir-2838

Dead hairpin entry

Stem-loop bmo-mir-2838


Accession
MI0012445
Description
Bombyx mori bmo-mir-2838 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1511 reads, 23.0 reads per million, 34 experiments
aaaugauuuaAAUUCAGCAAACUCACGGGAUAAACUCgcuaugguuuuauaugggagaucugugguagcUGCAUUCUUCAAAUCUUCg
....(((((.(((.((((..((.((((((.....(((.(((((......)))))))).)))))))).)))).)))....)))))....

Structure
aaau     ---a   U    AA  U      AUAAA   g     gu 
    gauuu    AAU CAGC  AC CACGGG     CUC cuaug  u
    |||||    ||| ||||  || ||||||     ||| |||||   
    CUAAA    UUA GUcg  ug gugucu     gag gguau  u
gCUU     CUUC   C    -a  -      ----a   -     au