miRBase entry: bmo-mir-2838

Stem-loop bmo-mir-2838


Accession
MI0012445
Description
Bombyx mori bmo-mir-2838 precursor miRNA


Sequence

1511 reads, 23.0 reads per million, 34 experiments
aaaugauuuaAAUUCAGCAAACUCACGGGAUAAACUCgcuaugguuuuauaugggagaucugugguagcUGCAUUCUUCAAAUCUUCg
....(((((.(((.((((..((.((((((.....(((.(((((......)))))))).)))))))).)))).)))....)))))....

Structure
aaau     ---a   U    AA  U      AUAAA   g     gu 
    gauuu    AAU CAGC  AC CACGGG     CUC cuaug  u
    |||||    ||| ||||  || ||||||     ||| |||||   
    CUAAA    UUA GUcg  ug gugucu     gag gguau  u
gCUU     CUUC   C    -a  -      ----a   -     au 


Annotation confidence Low
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Genome context
dbj|BSVE01000008.1|: 11368201-11368288 [+]

Database links

Mature bmo-miR-2838-5p

Accession MIMAT0013753
Description Bombyx mori bmo-miR-2838-5p mature miRNA
Sequence 11 - AAUUCAGCAAACUCACGGGAUAAACUC - 37
Evidence experimental
Illumina [1]
Database links

Mature bmo-miR-2838-3p

Accession MIMAT0053201
Description Bombyx mori bmo-miR-2838-3p mature miRNA
Sequence 70 - UGCAUUCUUCAAAUCUUC - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148