miRBase entry: bmo-mir-2839

Stem-loop bmo-mir-2839


Accession
MI0012446
Description
Bombyx mori bmo-mir-2839 precursor miRNA


Sequence

143 reads, 34 reads per million, 3 experiments
aaucauaccgUCAAACAGAGCGCCAGCGCUAUgagcgcuauagCGCUGGCGCACUGUUUGACGGUauguuaccgu
...(((((((((((((((.((((((((((((((.....)))))))))))))).))))))))))))))).......

Structure
----aau               A              a 
       cauaccgUCAAACAG GCGCCAGCGCUAUg g
       ||||||||||||||| |||||||||||||| c
       guaUGGCAGUUUGUC CGCGGUCGCgauau g
ugccauu               A              c 


Annotation confidence Not enough data
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Genome context
NW_004582026.1: 5994524-5994598 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-2839
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2839-5p

Accession MIMAT0013754
Description Bombyx mori bmo-miR-2839-5p mature miRNA
Sequence 11 - UCAAACAGAGCGCCAGCGCUAU - 32
Evidence experimental
Illumina [1]

Mature bmo-miR-2839-3p

Accession MIMAT0013755
Description Bombyx mori bmo-miR-2839-3p mature miRNA
Sequence 44 - CGCUGGCGCACUGUUUGACGGU - 65
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148