Stem-loop bmo-mir-2780c

Accession

MI0012451

Description

Bombyx mori bmo-mir-2780c precursor miRNA

Sequence

21332 reads, 462.0 reads per million, 34 experiments

ccacggugaaAAGGGCGUUAAAUGAAGACUUAGggcuucgggcauauccaagAAAAACAGGACAUCGUUUGAAUGCUcgucuaaugga
(((....((...(((((((((((((.(.(((....(((.((......)))))......))).).))))))).)))))).))...))).

Structure

-   cggu  aAA      -       A A   --AGgg   c  gc 
 cca    ga   GGGCGU UAAAUGA G CUU      cuu gg  a
 |||    ||   |||||| ||||||| | |||      ||| ||   
 ggu    cu   cUCGUA GUUUGCU C GGA      gaa cc  u
a   -aau  --g      A       A A   CAAAAA   -  ua 

Annotation confidence Medium

Genome context

dbj|BSVE01000018.1|: 3839458-3839545 [-]

Mature bmo-miR-2780c-5p

• Accession: MIMAT0013760
• Description: Bombyx mori bmo-miR-2780c-5p mature miRNA
• Sequence: 11 - AAGGGCGUUAAAUGAAGACUUAG - 33
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2780c-3p

• Accession: MIMAT0053203
• Description: Bombyx mori bmo-miR-2780c-3p mature miRNA
• Sequence: 53 - AAAAACAGGACAUCGUUUGAAUGCU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148