Stem-loop bmo-mir-2843-1

Accession

MI0012456

Description

Bombyx mori bmo-mir-2843-1 precursor miRNA

Sequence

21234 reads, 306.0 reads per million, 34 experiments

ggcuuuggagUCUAAGGAAAUUAGGUCGGAUAcauacgaauuaguguguuUGCGACGCUGUCUUCGUGAUCAAGccu
(((((.(..(((....(((..(((((((.(.((((((......)))))).).)))).)))..)))..))))))))).

Structure

-     u ga   UAAG   AU   -    G U      ga 
 ggcuu g  gUC    GAA  UAG GUCG A Acauac  a
 ||||| |  |||    |||  ||| |||| | ||||||   
 ccGAA C  UAG    CUU  GUC CAGC U ugugug  u
u     - --   --UG   CU   G    G u      au 

Annotation confidence Medium

Genome context

dbj|BSVE01000018.1|: 10380171-10380247 [+]

Mature bmo-miR-2843-5p

• Accession: MIMAT0013762
• Description: Bombyx mori bmo-miR-2843-5p mature miRNA
• Sequence: 11 - UCUAAGGAAAUUAGGUCGGAUA - 32
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2843-1-3p

• Accession: MIMAT0013763
• Description: Bombyx mori bmo-miR-2843-1-3p mature miRNA
• Sequence: 51 - UGCGACGCUGUCUUCGUGAUCAAG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148