Stem-loop bmo-mir-2845

Accession

MI0012465

Description

Bombyx mori bmo-mir-2845 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2845
(7 sentences)

Sequence

14223 reads, 299.0 reads per million, 34 experiments

ugccaagaaguaaUCCGGCUUCUGGGAUGGAUCGUCCCacucuacaacaugaCCGUUGCCAGCUGCUGUGCGUAaguguugguu
.(((((.(..((..(((((..(((((((((.((((.............))))))))).))))..)))).)..))..).))))).

Structure

u     g ag  aU -    UU    -     A    CCCac 
 gccaa a  ua  C CGGC  CUGG GAUGG UCGU     u
 ||||| |  ||  | ||||  |||| ||||| ||||     c
 ugguu u  AU  G GUCG  GACC UUGCC agua     u
u     g ga  GC U    UC    G     -    caaca 

Annotation confidence Medium

Genome context

dbj|BSVE01000024.1|: 13389440-13389523 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-2845

Mature bmo-miR-2845-5p

• Accession: MIMAT0053206
• Description: Bombyx mori bmo-miR-2845-5p mature miRNA
• Sequence: 14 - UCCGGCUUCUGGGAUGGAUCGUCCC - 38
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2845-3p

• Accession: MIMAT0013766
• Description: Bombyx mori bmo-miR-2845-3p mature miRNA
• Sequence: 53 - CCGUUGCCAGCUGCUGUGCGUA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148