Stem-loop bmo-mir-2848

Accession

MI0012469

Description

Bombyx mori bmo-mir-2848 precursor miRNA

Sequence

546 reads, 10.0 reads per million, 33 experiments

ugccgcuaccaaccuugagauaugaguaaauggCUGCCCUACCCUUCAAACcggaacgcauuacugcUUCGCGGCAGAAAUAGGCAAAguggugguac
(((((((((...((.................)).((((.((...(((...((((((.(((....)))))).)))..))).))))))..))))))))).

Structure

-         caaccuugagauaugaguaaauggC    C  CCC   AAA   -   c   u 
 ugccgcuac                         UGCC UA   UUC   Ccg gaa gca u
 |||||||||                         |||| ||   |||   ||| ||| |||  
 augguggug                         ACGG AU   AAG   GGC CUU cgu a
c         -----------------------AA    -  --A   -AC   G   -   c 

Annotation confidence Medium

Genome context

dbj|BSVE01000026.1|: 10321953-10322050 [-]

Mature bmo-miR-2848-5p

• Accession: MIMAT0053208
• Description: Bombyx mori bmo-miR-2848-5p mature miRNA
• Sequence: 34 - CUGCCCUACCCUUCAAAC - 51
• Evidence: experimental ; Illumina [1]

Mature bmo-miR-2848-3p

• Accession: MIMAT0013770
• Description: Bombyx mori bmo-miR-2848-3p mature miRNA
• Sequence: 68 - UUCGCGGCAGAAAUAGGCAAA - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148