Stem-loop hvt-mir-H1

Accession

MI0012473

Description

Herpesvirus of turkeys hvt-mir-H1 precursor miRNA

Sequence

cuucgggcaccguucaucucggcgcgccgagcgcgcgcuagcugaucGCGCAGGGAUGUCGGGCGCGCCg
...((.((.(((..((((((.(((((...(((........)))...))))).)))))).))))).))...

Structure

cuu  g  a   uu      g     ccg   gcg 
   cg gc ccg  caucuc gcgcg   agc   c
   || || |||  |||||| |||||   |||    
   GC CG GGC  GUAGGG CGCGc   ucg   g
gCC  G  -   -U      A     uag   auc 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvt-miR-H1

• Accession: MIMAT0012710
• Description: Herpesvirus of turkeys hvt-miR-H1 mature miRNA
• Sequence: 48 - GCGCAGGGAUGUCGGGCGCGCC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19328516
   MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
   "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
   "Virology (2009) 388:128-136