Stem-loop hvt-mir-H4

Accession

MI0012476

Description

Herpesvirus of turkeys hvt-mir-H4 precursor miRNA

Sequence

GGCGGAGGUGUGAUAUGGUGUgauauggugugauaugaaugccuaugcGGGCGGUGGCACCCGCCGUCGGAGUAac
((((...((((.((((.(((...))).)))).))))...))))(((.(.((((((((...)))))))).).)))..

Structure

GGCGGAGGUGUGAUAUGGUGUgauauggugugauaugaaugcc   g G        C 
                                           uau c GGCGGUGG  
                                           ||| | |||||||| A
                                           AUG G CUGCCGCC  
-----------------------------------------ca   A G        C 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvt-miR-H4-5p

• Accession: MIMAT0012714
• Description: Herpesvirus of turkeys hvt-miR-H4-5p mature miRNA
• Sequence: 1 - GGCGGAGGUGUGAUAUGGUGU - 21
• Evidence: experimental ; Illumina [1]

Mature hvt-miR-H4-3p

• Accession: MIMAT0012715
• Description: Herpesvirus of turkeys hvt-miR-H4-3p mature miRNA
• Sequence: 49 - GGGCGGUGGCACCCGCCGUCGGAGUA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19328516
   MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
   "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
   "Virology (2009) 388:128-136