Stem-loop iltv-mir-I5

Accession

MI0012485

Description

Infectious laryngotracheitis virus iltv-mir-I5 precursor miRNA

Sequence

ucguuCUUCUCGUCCCCGUCUUCUUCAGAugagcuggagucUGAAGAAGACGACGACGAGGAGCAUgagg
((((.(((((((((..((((((((((((((........))))))))))))))..))))))))).))))..

Structure

--    u         CC              gag 
  ucgu CUUCUCGUC  CGUCUUCUUCAGAu   c
  |||| |||||||||  ||||||||||||||    
  agUA GAGGAGCAG  GCAGAAGAAGUcug   u
gg    C         CA              agg 

Annotation confidence Not enough data

Genome context

Unknown

Mature iltv-miR-I5-5p

• Accession: MIMAT0012728
• Description: Infectious laryngotracheitis virus iltv-miR-I5-5p mature miRNA
• Sequence: 6 - CUUCUCGUCCCCGUCUUCUUCAGA - 29
• Evidence: experimental ; Illumina [1], 454 [2]

Mature iltv-miR-I5-3p

• Accession: MIMAT0012729
• Description: Infectious laryngotracheitis virus iltv-miR-I5-3p mature miRNA
• Sequence: 42 - UGAAGAAGACGACGACGAGGAGCAU - 66
• Evidence: experimental ; Illumina [1], 454 [2]

References

1. PubMed ID: 19328516
   MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
   "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
   "Virology (2009) 388:128-136


2. PubMed ID: 19728068
   Identification and expression analysis of infectious laryngotracheitis virus encoding microRNAs
   "Rachamadugu R, Lee JY, Wooming A, Kong BW"
   "Virus Genes (2009) 39:301-308