Stem-loop iltv-mir-I6

Accession

MI0012486

Description

Infectious laryngotracheitis virus iltv-mir-I6 precursor miRNA

Sequence

ucucuGUCUCCUGUACCCUCAUCGUCGuugucggucuucccaACGCUGAGGGGCCAUGAGACAGUgaguc
((.(((((((.((..((((((..(.(((((..((....))))))))))))))..)).))))))).))...

Structure

---  u       C  UA      UC U     uc  u 
   uc cuGUCUC UG  CCCUCA  G CGuug  gg c
   || ||||||| ||  ||||||  | |||||  ||  
   ag GACAGAG AC  GGGAGU  C GCAac  cc u
cug  U       U  CG      -- -     --  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature iltv-miR-I6-5p

• Accession: MIMAT0012730
• Description: Infectious laryngotracheitis virus iltv-miR-I6-5p mature miRNA
• Sequence: 6 - GUCUCCUGUACCCUCAUCGUCG - 27
• Evidence: experimental ; Illumina [1], 454 [2]

Mature iltv-miR-I6-3p

• Accession: MIMAT0012731
• Description: Infectious laryngotracheitis virus iltv-miR-I6-3p mature miRNA
• Sequence: 43 - ACGCUGAGGGGCCAUGAGACAGU - 65
• Evidence: experimental ; Illumina [1], 454 [2]

References

1. PubMed ID: 19328516
   MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
   "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
   "Virology (2009) 388:128-136


2. PubMed ID: 19728068
   Identification and expression analysis of infectious laryngotracheitis virus encoding microRNAs
   "Rachamadugu R, Lee JY, Wooming A, Kong BW"
   "Virus Genes (2009) 39:301-308