Stem-loop mdo-mir-26-2

Accession

MI0012490

Description

Monodelphis domestica mdo-mir-26-2 precursor miRNA

Sequence

171564 reads, 2898 reads per million, 5 experiments

ccguUUCAAGUAAUCCAGGAUAGGCuguuuucucuucagCCUGUUCUCCAUUACUUGGUUCgggggcc
(((..(((((((((..(((((((((((.........)))))))))))..)))))))))..))).....

Structure

-----   uU         CC           uuu 
     ccg  UCAAGUAAU  AGGAUAGGCug   u
     |||  |||||||||  |||||||||||   c
     ggC  GGUUCAUUA  UCUUGUCCgac   u
ccggg   UU         CC           uuc 

Annotation confidence Medium

Genome context

chr7: 174297322-174297389 [-]

Mature mdo-miR-26-5p

• Accession: MIMAT0012736
• Description: Monodelphis domestica mdo-miR-26-5p mature miRNA
• Sequence: 5 - UUCAAGUAAUCCAGGAUAGGC - 25
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-26-2-3p

• Accession: MIMAT0026929
• Description: Monodelphis domestica mdo-miR-26-2-3p mature miRNA
• Sequence: 40 - CCUGUUCUCCAUUACUUGGUUC - 61
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45