Stem-loop mdo-mir-26-3

Accession

MI0012491

Description

Monodelphis domestica mdo-mir-26-3 precursor miRNA

Sequence

170292 reads, 2878 reads per million, 5 experiments

accuggUUCAAGUAAUCCAGGAUAGGCuggacccauucucaucggCCUAUUCUCGACUACUUGCACUcgg
.((.(((.((((((.((.(((((((((((.............))))))))))).)).)))))).))).))

Structure

a  u   U      A  C           gaccc 
 cc ggU CAAGUA UC AGGAUAGGCug     a
 || ||| |||||| || |||||||||||     u
 gg UCA GUUCAU AG UCUUAUCCggc     u
-  c   C      C  C           uacuc 

Annotation confidence Low

Genome context

NW_001584920.1: 60283-60352 [-]

Mature mdo-miR-26-5p

• Accession: MIMAT0012736
• Description: Monodelphis domestica mdo-miR-26-5p mature miRNA
• Sequence: 7 - UUCAAGUAAUCCAGGAUAGGC - 27
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-26-3-3p

• Accession: MIMAT0031030
• Description: Monodelphis domestica mdo-miR-26-3-3p mature miRNA
• Sequence: 46 - CCUAUUCUCGACUACUUGCACU - 67
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45