Stem-loop mdo-mir-26-1

Accession

MI0012492

Description

Monodelphis domestica mdo-mir-26-1 precursor miRNA

Sequence

171580 reads, 2900 reads per million, 5 experiments

UUCAAGUAAUCCAGGAUAGGCuguguccagcugcgggCCUAUCCUUGAUUGCUUGUUUCuggagguggc
..(((((((((.((((((((((.(((......))))))))))))).)))))))))..............

Structure

------------UU         C          g   cc 
              CAAGUAAUC AGGAUAGGCu ugu  a
              ||||||||| |||||||||| |||   
              GUUCGUUAG UCCUAUCCgg gcg  g
cgguggagguCUUU         U          -   uc 

Annotation confidence High

Genome context

NW_001583875.1: 213879-213947 [-]

Mature mdo-miR-26-5p

• Accession: MIMAT0012736
• Description: Monodelphis domestica mdo-miR-26-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGC - 21
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-26-1-3p

• Accession: MIMAT0031031
• Description: Monodelphis domestica mdo-miR-26-1-3p mature miRNA
• Sequence: 38 - CCUAUCCUUGAUUGCUUGUUUC - 59
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45