Stem-loop mdo-mir-126

Accession

MI0012499

Description

Monodelphis domestica mdo-mir-126 precursor miRNA

Sequence

812518 reads, 11834 reads per million, 5 experiments

ggguCAUUAUUACUUUUGGUACGCGcugugacacaucaaacUCGUACCGUGAGUAAUAAUGCGccauug
((..(((((((((((.(((((((.....(((....)))....))))))).)))))))))))..))....

Structure

----  gu           U       CGcug   c 
    gg  CAUUAUUACUU UGGUACG     uga a
    ||  ||||||||||| |||||||     |||  
    cc  GUAAUAAUGAG GCCAUGC     acu c
guua  GC           U       -Ucaa   a 

Annotation confidence High

Genome context

chr1: 464882831-464882899 [-]

Mature mdo-miR-126-5p

• Accession: MIMAT0012743
• Description: Monodelphis domestica mdo-miR-126-5p mature miRNA
• Sequence: 5 - CAUUAUUACUUUUGGUACGCG - 25
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-126-3p

• Accession: MIMAT0026935
• Description: Monodelphis domestica mdo-miR-126-3p mature miRNA
• Sequence: 42 - UCGUACCGUGAGUAAUAAUGCG - 63
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45