Stem-loop mdo-mir-146b

Accession

MI0012503

Description

Monodelphis domestica mdo-mir-146b precursor miRNA

Sequence

159559 reads, 3184.0 reads per million, 5 experiments

cuggcucUGAGAACUGAAUUCCAUAGGCUGUgagcucaugcaaauGCCCUAGGAAGUCAGUUCUGGAg
....((((.((((((((.((((.((((.(((..((....))..))).)))))))).))))))))))))

Structure

cugg    G        A    A    C   ga  u 
    cucU AGAACUGA UUCC UAGG UGU  gc c
    |||| |||||||| |||| |||| |||  ||  
    gAGG UCUUGACU AAGG AUCC Gua  cg a
----    -        G    -    C   aa  u 

Annotation confidence High

Genome context

ref|NC_077227.1|: 114050678-114050745 [-]

Mature mdo-miR-146b-5p

• Accession: MIMAT0012747
• Description: Monodelphis domestica mdo-miR-146b-5p mature miRNA
• Sequence: 8 - UGAGAACUGAAUUCCAUAGGCUGU - 31
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-146b-3p

• Accession: MIMAT0026939
• Description: Monodelphis domestica mdo-miR-146b-3p mature miRNA
• Sequence: 46 - GCCCUAGGAAGUCAGUUCUGGA - 67
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45